Research interests |
Publications |
Software |
Teaching |
Short CV
Bayesian network learning tools
- fCLL, provides discriminative learning of Bayesian networks via the WEKA package.
- CkG, learns consistent k-graphs with the most commonly used scoring criteria.
Motif discovery tools
- GRISOTTO, uncovers motifs using prior information from a set of co-regulated DNA sequences.
- RISOTTO, extracts (long) conserved regions that occur in a well-ordered and regularly
spaced manner in a set of DNA sequences.
- RISO, extracts conserved regions that occur in a well-ordered and regularly spaced manner in a set of DNA sequences. RISO is also available at YEASTRACT-DISCOVERER within the YEASTRACT repository of regulatory associations for Saccharomyces cerevisiae.
- PSMILE, a parallelization of the
SMILE algorithm.
Research interests |
Publications |
Software |
Teaching |
Short CV